MolNFT v1 · #157556 · protein
Sega-asym, conformation of tdp-43 low complexity domain segment a asym
6N3B · Tar DNA-binding protein 43: “Sega-asym, conformation of tdp-43 low complexity domain segment a asym”. Electron microscopy. MolNFT v1 #157556 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6N3B
- Type
- protein
- Length
- 385 residues
- Chains
- 10
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tar DNA-binding protein 43
- UniProt
- Q13148
Structure
electron microscopy · 2 distinct chains · 0% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E, G, I | Tar DNA-binding protein 43 | protein | 36 | 0% helix, 39% strand | Q13148 |
| B, D, F, H, J | Tar DNA-binding protein 43 | protein | 41 | 0% helix, 49% strand | Q13148 |
Interfaces
29 interfaces between chains.
- B–H · 1595 Ų buried · 44 hydrogen bonds · protein-protein
- B–J · 1594 Ų buried · 44 hydrogen bonds · protein-protein
- F–H · 1591 Ų buried · 44 hydrogen bonds · protein-protein
- D–F · 1588 Ų buried · 44 hydrogen bonds · protein-protein
- A–I · 1445 Ų buried · 46 hydrogen bonds · protein-protein
Compared structures
- 6N3B · SegA-asym, conformation of TDP-43 low complexity domain segment A asym · the same entry in another collection · chain J against J, TM-score 1.00
- Q13148 · AlphaFold monomer V2.0 prediction for tar DNA-binding protein 43 (Q13148) · a predicted model of the same protein · chain B against A, TM-score 0.31
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13148
- Elsewhere: RCSB PDB 6N3B · PDBe 6N3B · UniProt Q13148
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.