MolNFT v1 · #157525 · protein
The crystal structure of caldicellulosiruptor kristjanssonii tapirin C-terminal domain
6N2B: “The crystal structure of caldicellulosiruptor kristjanssonii tapirin C-terminal domain”. X-ray diffraction, 1 ligand (CA), 2 pockets (best druggability 0.64). MolNFT v1 #157525 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6N2B
- Type
- protein
- Length
- 709 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tapirin
- UniProt
- E4S4B2
- Ligands
- CA
- Pockets
- 2 · best druggability 0.64
Structure
x-ray diffraction · 2 distinct chains · 11% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tapirin | protein | 354 | 11% helix, 48% strand | E4S4B2 |
| B | Tapirin | protein | 355 | 11% helix, 48% strand | E4S4B2 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 596 | 0.64 | 0.75 | 74 | GOL |
| 2 | 137 | 0.44 | 0.76 | 24 | empty |
Interfaces
1 interface between chains.
- A–B · 505 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 6N2B · The Crystal Structure of Caldicellulosiruptor kristjanssonii Tapirin C-terminal domain · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E4S4B2
- Elsewhere: RCSB PDB 6N2B · PDBe 6N2B · UniProt E4S4B2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.