MolNFT v1 · #157402 · protein
Structure of 53BP1 tandem tudor domains in complex with small molecule UNC2991
6MXX: “Structure of 53BP1 tandem tudor domains in complex with small molecule UNC2991”. X-ray diffraction, 2 ligands (K6P, PO4). MolNFT v1 #157402 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6MXX
- Type
- protein
- Length
- 1,196 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q12888
- Ligands
- K6P, PO4
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D, E, F | — | protein | 120 | — | Q12888 |
| B, G, H | — | protein | 119 | — | Q12888 |
| C | — | protein | 121 | — | Q12888 |
| I | — | protein | 118 | — | Q12888 |
| J | — | protein | 120 | — | Q12888 |
Ligands and binding sites
- K6P · N-[3-(tert-butylamino)propyl]-3-iodobenzamide · ligand · 5 copies · chains A, B, C, D, E, F, G, H, I, J
- PO4 · Phosphate ion · ion · 21 copies · chains A, B, D, C, E, F, G, H, I, J
- FMT · Formic acid · additive · 4 copies · chains B, H, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6MXX · Structure of 53BP1 tandem Tudor domains in complex with small molecule UNC2991 · the same entry in another collection · chain J against J, TM-score 1.00
- Q12888 · AlphaFold monomer V2.0 prediction for TP53-binding protein 1 (Q12888) · a predicted model of the same protein · chain I against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q12888
- Elsewhere: RCSB PDB 6MXX · PDBe 6MXX · UniProt Q12888
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