MolNFT v1 · #156342 · protein + DNA + RNA
Crystal structure of streptococcus thermophilus CAS9 in complex with agga pam
6M0X: “Crystal structure of streptococcus thermophilus CAS9 in complex with agga pam”. X-ray diffraction, 2 ligands (BA, MG). MolNFT v1 #156342 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6M0X
- Type
- protein + DNA + RNA
- Length
- 1,138 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q03LF7
- Ligands
- BA, MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1032 | — | Q03LF7 |
| B | — | rna | 70 | — | — |
| C | — | dna | 28 | — | — |
| D | — | dna | 8 | — | — |
Ligands and binding sites
- BA · Barium ion · metal · 14 copies · chains A, C, B
- MG · Magnesium ion · metal · 2 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6M0X · Crystal structure of Streptococcus thermophilus Cas9 in complex with AGGA PAM · the same entry in another collection · chain A against A, TM-score 1.00
- Q03LF7 · AlphaFold monomer V2.0 prediction for CRISPR-associated endonuclease CAS9 1 (Q03LF7) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q03LF7
- Elsewhere: RCSB PDB 6M0X · PDBe 6M0X · UniProt Q03LF7
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