MolNFT v1 · #156171 · protein
Cryo-EM structure of the multiple peptide resistance factor (mprf) loaded with one lysyl-phosphatidylglycerol molecule
6LVF: “Cryo-EM structure of the multiple peptide resistance factor (mprf) loaded with one lysyl-phosphatidylglycerol…”. Electron microscopy, 3 ligands (EV9, LHG, PGT). MolNFT v1 #156171 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6LVF
- Type
- protein
- Length
- 1,586 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- L0LM43
- Ligands
- EV9, LHG, PGT
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A | — | protein | 793 | — | L0LM43 |
Ligands and binding sites
- EV9 · [(2~{R})-3-[[(2~{S})-3-[(2~{S})-2,6-bis(azanyl) hexanoyl]oxy-2-oxidanyl-propoxy]-oxidanyl-phosphoryl]oxy-2-hexadecanoyloxy-propyl] hexadecanoate · ligand · 2 copies · chains B, A
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · ligand · 2 copies · chains B, A
- PGT · (1S)-2-{[{[(2R)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate · ligand · 2 copies · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6LVF · Cryo-EM structure of the multiple peptide resistance factor (MprF) loaded with one… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt L0LM43
- Elsewhere: RCSB PDB 6LVF · PDBe 6LVF · UniProt L0LM43
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