MolNFT v1 · #156156 · protein
Crystal structure of the soluble domain of the multiple peptide resistance factor (mprf) from rhizobium tropici
6LV0 · Low pH-inducible protein lpia: “Crystal structure of the soluble domain of the multiple peptide resistance factor (mprf) from rhizobium…”. X-ray diffraction, 8 pockets (best druggability 0.78). MolNFT v1 #156156 on GenesisL1: 3D…
- PDB
- 6LV0
- Type
- protein
- Length
- 638 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Low pH-inducible protein lpia
- UniProt
- L0LM43
- Pockets
- 8 · best druggability 0.78
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Low pH-inducible protein lpia | protein | 319 | 39% helix, 26% strand | L0LM43 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 140 | 0.78 | 0.96 | 32 | empty |
| 2 | 702 | 0.76 | 0.81 | 93 | empty |
| 3 | 111 | 0.51 | 0.81 | 23 | empty |
| 4 | 120 | 0.48 | 0.80 | 23 | empty |
| 5 | 124 | 0.39 | 0.74 | 30 | empty |
Interfaces
1 interface between chains.
- A–B · 1175 Ų buried · 17 hydrogen bonds · protein-protein
Compared structures
- 6LV0 · Crystal structure of the soluble domain of the multiple peptide resistance factor (MprF)… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt L0LM43
- Elsewhere: RCSB PDB 6LV0 · PDBe 6LV0 · UniProt L0LM43
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