MolNFT v1 · #156025 · protein
Complex structure of chao with product from erythrobacteraceae bacterium
6LQL · Amine oxidase: “Complex structure of chao with product from erythrobacteraceae bacterium”. X-ray diffraction, 2 ligands (FAD, F0C), 2 pockets (best druggability 0.88). MolNFT v1 #156025 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6LQL
- Type
- protein
- Length
- 450 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Amine oxidase
- Ligands
- FAD, F0C
- Pockets
- 2 · best druggability 0.88
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Amine oxidase | protein | 450 | 40% helix, 22% strand | — |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · chains A
- F0C · 1-[(4-methoxyphenyl)methyl]-3,4,5,6,7,8-hexahydroisoquinoline · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 507 | 0.88 | 0.94 | 72 | FAD, F0C |
| 2 | 174 | 0.56 | 0.80 | 23 | empty |
Compared structures
- 6LQL · Complex structure of CHAO with product from Erythrobacteraceae bacterium · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6LQL · PDBe 6LQL
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