MolNFT v1 · #156016 · protein
Crystal structure of cyclohexylamine oxidase from erythrobacteraceae bacterium
6LQC: “Crystal structure of cyclohexylamine oxidase from erythrobacteraceae bacterium”. X-ray diffraction, 1 ligand (FAD), 2 pockets (best druggability 0.86). MolNFT v1 #156016 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6LQC
- Type
- protein
- Length
- 450 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cyclohexylamine oxidase
- Ligands
- FAD
- Pockets
- 2 · best druggability 0.86
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cyclohexylamine oxidase | protein | 450 | 39% helix, 22% strand | — |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 412 | 0.86 | 0.94 | 62 | FAD |
| 2 | 125 | 0.52 | 0.80 | 16 | empty |
Compared structures
- 6LQC · Crystal structure of Cyclohexylamine Oxidase from Erythrobacteraceae bacterium · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6LQC · PDBe 6LQC
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