MolNFT v1 · #156014 · protein
Voltage-gated sodium channel NAV1.5 with quinidine
6LQA: “Voltage-gated sodium channel NAV1.5 with quinidine”. Electron microscopy, 2 ligands (QDN, NAG). MolNFT v1 #156014 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6LQA
- Type
- protein
- Length
- 1,151 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q14524
- Ligands
- QDN, NAG
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 1151 | — | Q14524 |
Ligands and binding sites
- QDN · Quinidine · ligand · chains B
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 9 copies · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6LQA · voltage-gated sodium channel Nav1.5 with quinidine · the same entry in another collection · chain B against B, TM-score 1.00
- Q14524 · AlphaFold monomer V2.0 prediction for sodium channel protein type 5 subunit alpha (Q14524) · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14524
- Elsewhere: RCSB PDB 6LQA · PDBe 6LQA · UniProt Q14524
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