MolNFT v1 · #155692 · protein
Crystal structure of mouse DCAR2 crd domain complex with IPM2
6LFJ: “Crystal structure of mouse DCAR2 crd domain complex with IPM2”. X-ray diffraction, 3 ligands (IPD, MAN, CA). MolNFT v1 #155692 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6LFJ
- Type
- protein
- Length
- 265 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9D8Q7
- Ligands
- IPD, MAN, CA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 133 | — | Q9D8Q7 |
| B | — | protein | 132 | — | Q9D8Q7 |
Ligands and binding sites
- IPD · D-myo-inositol-1-phosphate · ligand · 2 copies
- MAN · alpha-D-mannopyranose · sugar · 3 copies · chains A, B
- CA · Calcium ion · metal · 2 copies · chains A, B
- B3P · 2-[3-(2-hydroxy-1,1-dihydroxymethyl-ethylamino)-propylamino]-2-hydroxymethyl-propane-1,3-diol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6LFJ · Crystal structure of mouse DCAR2 CRD domain complex with IPM2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9D8Q7
- Elsewhere: RCSB PDB 6LFJ · PDBe 6LFJ · UniProt Q9D8Q7
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