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MolNFT v1 · #155190 · protein

Membrane protein

6KZO: “Membrane protein”. Electron microscopy, 4 ligands (3PE, Y01, NAG). MolNFT v1 #155190 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6KZO
Type
protein
Length
967 residues
Chains
1
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
O43497
Ligands
3PE, Y01, NAG, CA

Structure

electron microscopy · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein967—O43497

Ligands and binding sites

  • 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine · ligand · 13 copies · chains A
  • Y01 · Cholesterol hemisuccinate · ligand · 2 copies · chains A
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains A
  • CA · Calcium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6KZO · membrane protein · the same entry in another collection · chain A against A, TM-score 1.00
  • O43497 · AlphaFold monomer V2.0 prediction for voltage-dependent T-type calcium channel subunit… · a predicted model of the same protein · chain A against A, TM-score 0.99

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