MolNFT v1 · #154846 · protein

Crystal structure of the cholic acid bound ramr determined with xtalab synergy

6KO8 · Putative regulatory protein: “Crystal structure of the cholic acid bound ramr determined with xtalab synergy”. X-ray diffraction, 2 ligands (CHD, SO4), 1 pocket (best druggability 0.76). MolNFT v1 #154846 on GenesisL1: 3D structure…

PDB: 6KO8
Type: protein
Length: 185 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative regulatory protein
UniProt: A0A0F6AY66
Ligands: CHD, SO4
Pockets: 1 · best druggability 0.76

Structure

x-ray diffraction · 1 distinct chain · 74% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative regulatory protein	protein	185	74% helix, 1% strand	A0A0F6AY66

Ligands and binding sites

CHD · Cholic acid · ligand · chains A
SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	623	0.76	0.81	38	CHD

Compared structures

6KO8 · Crystal structure of the Cholic acid bound RamR determined with XtaLAB Synergy · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0F6AY66
Elsewhere: RCSB PDB 6KO8 · PDBe 6KO8 · UniProt A0A0F6AY66

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