MolNFT v1 · #154358 · protein
Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete phytophthora capsici.
6K8P: “Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete phytophthora capsici.”. X-ray diffraction, 4 ligands (THM, R1P, TDR). MolNFT v1 #154358 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6K8P
- Type
- protein
- Length
- 1,148 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A410UCT3
- Ligands
- THM, R1P, TDR, PO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 294 | — | A0A410UCT3 |
| B, D | — | protein | 280 | — | A0A410UCT3 |
Ligands and binding sites
- THM · Thymidine · ligand · 2 copies · chains A, B, C, D
- R1P · 1-O-phosphono-alpha-D-ribofuranose · ligand · 2 copies · chains A, B, C, D
- TDR · Thymine · ligand · 2 copies · chains A, B, C, D
- PO4 · Phosphate ion · ion · 2 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6K8P · Structural and catalytic analysis of two diverse uridine phosphorylases in the oomycete… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A410UCT3
- Elsewhere: RCSB PDB 6K8P · PDBe 6K8P · UniProt A0A410UCT3
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