MolNFT v1 · #154293 · protein
The crystal structure of light-driven cyanobacterial chloride importer (N63A/P118A) mastigocladopsis repens
6K6K: “The crystal structure of light-driven cyanobacterial chloride importer (N63A/P118A) mastigocladopsis repens”. X-ray diffraction, 3 ligands (OLA, RET, CL), 1 pocket (best druggability 0.82). MolNFT v1 #154293 on GenesisL1: 3D…
- PDB
- 6K6K
- Type
- protein
- Length
- 219 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cyanobacterial chloride importer
- Ligands
- OLA, RET, CL
- Pockets
- 1 · best druggability 0.82
Structure
x-ray diffraction · 1 distinct chain · 82% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cyanobacterial chloride importer | protein | 219 | 82% helix, 1% strand | — |
Ligands and binding sites
- OLA · Oleic acid · ligand · 4 copies · chains A
- RET · Retinal · ligand · chains A
- CL · Chloride ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 225 | 0.82 | 0.95 | 44 | RET |
Modifications
Observed in the structure: 1 cofactor (retinal Schiff base).
Compared structures
- 6K6K · The crystal structure of light-driven cyanobacterial chloride importer (N63A/P118A)… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6K6K · PDBe 6K6K
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