MolNFT v1 · #154253 · protein
Hyperthermophilic GH6 cellobiohydrolase II (HMCEL6A) in complex with trisaccharide
6K54: “Hyperthermophilic GH6 cellobiohydrolase II (HMCEL6A) in complex with trisaccharide”. X-ray diffraction, 3 ligands (BGC, GLC, CA). MolNFT v1 #154253 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6K54
- Type
- protein
- Length
- 1,284 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- BGC, GLC, CA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 428 | — | — |
Ligands and binding sites
- BGC · beta-D-glucopyranose · sugar · 12 copies · chains A, B, C
- GLC · alpha-D-glucopyranose · sugar · chains A
- CA · Calcium ion · metal · 7 copies · chains A, B, C
- IMD · Imidazole · additive · 6 copies · chains A, B, C
- PEG · Di(hydroxyethyl)ether · additive · 3 copies · chains A, C
- PGE · Triethylene glycol · additive · 2 copies · chains A, B
- PE4 · 2-{2-[2-(2-{2-[2-(2-ethoxy-ethoxy)-ethoxy]-ethoxy}-ethoxy)-ethoxy]-ethoxy}-ethanol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6K54 · Hyperthermophilic GH6 cellobiohydrolase II (HmCel6A) in complex with trisaccharide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6K54 · PDBe 6K54
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