MolNFT v1 · #154124 · protein
Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides
6K0V: “Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides”. X-ray diffraction, 4 ligands (GLC, BGC, CA). MolNFT v1 #154124 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6K0V
- Type
- protein
- Length
- 2,248 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A068PS59
- Ligands
- GLC, BGC, CA, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 562 | — | A0A068PS59 |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 19 copies · chains A, B, C, D
- BGC · beta-D-glucopyranose · sugar · chains B
- CA · Calcium ion · metal · 4 copies · chains A, B, C, D
- SO4 · Sulfate ion · ion · 23 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6K0V · Catalytic domain of GH87 alpha-1,3-glucanase D1069A in complex with tetrasaccharides · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A068PS59
- Elsewhere: RCSB PDB 6K0V · PDBe 6K0V · UniProt A0A068PS59
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