MolNFT v1 · #153931 · protein
Crystal structure of N-terminal domain of argz, C264S mutant, bound to substrate, an arginine dihydrolase from the ornithine-ammonia cycle in cyanobacteria
6JV1 · SLL1336 protein: “Crystal structure of N-terminal domain of argz, C264S mutant, bound to substrate, an arginine dihydrolase…”. X-ray diffraction, 1 ligand (ARG), 1 pocket (best druggability 0.75). MolNFT v1 #153931 on GenesisL1: 3D…
- PDB
- 6JV1
- Type
- protein
- Length
- 271 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SLL1336 protein
- UniProt
- P74535
- Ligands
- ARG
- Pockets
- 1 · best druggability 0.75
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SLL1336 protein | protein | 271 | 35% helix, 21% strand | P74535 |
Ligands and binding sites
- ARG · Arginine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 88 | 0.75 | 0.97 | 25 | empty |
Compared structures
- 6JV1 · Crystal Structure of N-terminal domain of ArgZ, C264S mutant, bound to Substrate, an… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P74535
- Elsewhere: RCSB PDB 6JV1 · PDBe 6JV1 · UniProt P74535
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