MolNFT v1 · #153758 · protein + DNA + RNA
Crystal structure of corynebacterium diphtheriae CAS9 in complex with sgrna and target DNA
6JOO: “Crystal structure of corynebacterium diphtheriae CAS9 in complex with sgrna and target DNA”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #153758 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JOO
- Type
- protein + DNA + RNA
- Length
- 965 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A2T1BQ76, Q6NKI3
- Ligands
- ZN
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 834 | — | A0A2T1BQ76, Q6NKI3 |
| B | — | rna | 95 | — | — |
| D | — | dna | 8 | — | — |
| C | — | dna | 28 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JOO · Crystal structure of Corynebacterium diphtheriae Cas9 in complex with sgRNA and target DNA · the same entry in another collection · chain A against A, TM-score 1.00
- Q6NKI3 · AlphaFold monomer V2.0 prediction for CRISPR-associated endonuclease CAS9 (Q6NKI3) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2T1BQ76
- Every structure of UniProt Q6NKI3
- Elsewhere: RCSB PDB 6JOO · PDBe 6JOO · UniProt A0A2T1BQ76 · UniProt Q6NKI3
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