Research workbench
Crystal structure of corynebacterium diphtheriae CAS9 in complex with sgrna and target DNA
Analyse Crystal structure of corynebacterium diphtheriae CAS9 in complex with sgrna and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6JOO
- Type
- protein + DNA + RNA
- Length
- 965 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A2T1BQ76, Q6NKI3
- Ligands
- ZN
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 834 | — | A0A2T1BQ76, Q6NKI3 |
| B | — | rna | 95 | — | — |
| D | — | dna | 8 | — | — |
| C | — | dna | 28 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JOO · Crystal structure of Corynebacterium diphtheriae Cas9 in complex with sgRNA and target DNA · the same entry in another collection · chain A against A, TM-score 1.00
- Q6NKI3 · AlphaFold monomer V2.0 prediction for CRISPR-associated endonuclease CAS9 (Q6NKI3) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2T1BQ76
- Every structure of UniProt Q6NKI3
- Elsewhere: RCSB PDB 6JOO · PDBe 6JOO · UniProt A0A2T1BQ76 · UniProt Q6NKI3
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