MolNFT v1 · #153753 · protein
Crystal structure of pdgfra T674I in complex with crenolanib by soaking
6JOJ: “Crystal structure of pdgfra T674I in complex with crenolanib by soaking”. X-ray diffraction, 3 ligands (6T2, CL, SO4). MolNFT v1 #153753 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JOJ
- Type
- protein
- Length
- 338 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P16234
- Ligands
- 6T2, CL, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 338 | — | P16234 |
Ligands and binding sites
- 6T2 · 1-(2-{5-[(3-Methyloxetan-3-yl)methoxy]-1H-benzimidazol-1-yl}quinolin-8-yl)piperidin-4-amine · ligand · chains A
- CL · Chloride ion · ion · 7 copies · chains A
- SO4 · Sulfate ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JOJ · Crystal structure of PDGFRA T674I in complex with crenolanib by soaking · the same entry in another collection · chain A against A, TM-score 1.00
- P16234 · AlphaFold monomer V2.0 prediction for platelet-derived growth factor receptor alpha… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P16234
- Elsewhere: RCSB PDB 6JOJ · PDBe 6JOJ · UniProt P16234
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