MolNFT v1 · #153590 · protein
Cryo-EM structure of giant freshwater prawn macrobrachium rosenbergii extra small virus (xsv) vlp
6JJA · Nucleocapsid protein CP17: “Cryo-EM structure of giant freshwater prawn macrobrachium rosenbergii extra small virus (xsv) vlp”. Electron microscopy, 1 ligand (CA). MolNFT v1 #153590 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6JJA
- Type
- protein
- Length
- 154 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nucleocapsid protein CP17
- UniProt
- Q15BP7
- Ligands
- CA
Structure
electron microscopy · 1 distinct chain · 7% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleocapsid protein CP17 | protein | 154 | 7% helix, 39% strand | Q15BP7 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JJA · Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii extra small virus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q15BP7
- Elsewhere: RCSB PDB 6JJA · PDBe 6JJA · UniProt Q15BP7
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