MolNFT v1 · #153523 · protein

Crystal structure of CISG15/NS1B complex

6JH0 · Non-structural protein 1: “Crystal structure of CISG15/NS1B complex”. X-ray diffraction, 3 pockets (best druggability 0.60). MolNFT v1 #153523 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6JH0
Type: protein
Length: 494 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Non-structural protein 1; ISG15 ubiquitin-like modifier
UniProt: P03502, E2R7R1
Pockets: 3 · best druggability 0.60

Structure

x-ray diffraction · 2 distinct chains · 44% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
C, A	Non-structural protein 1	protein	94	77% helix, 0% strand	P03502
D, B	ISG15 ubiquitin-like modifier	protein	153	24% helix, 34% strand	E2R7R1

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	206	0.60	0.81	20	empty
2	140	0.44	0.76	26	empty
3	52	0.26	0.74	13	empty

Interfaces

5 interfaces between chains.

C–A · 1849 Å² buried · 26 hydrogen bonds · protein-protein
C–B · 644 Å² buried · 2 hydrogen bonds · protein-protein
A–D · 590 Å² buried · 2 hydrogen bonds · protein-protein
C–D · 408 Å² buried · 3 hydrogen bonds · protein-protein
A–B · 348 Å² buried · 3 hydrogen bonds · protein-protein

Compared structures

6JH0 · Crystal structure of cISG15/NS1B complex · the same entry in another collection · chain C against C, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P03502
Every structure of UniProt E2R7R1
Elsewhere: RCSB PDB 6JH0 · PDBe 6JH0 · UniProt P03502 · UniProt E2R7R1

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