MolNFT v1 · #152949 · protein

Crystal structure of the acyltransferase domain from the second module of the salinomycin polyketide synthase

6IYO · Type I modular polyketide synthase: “Crystal structure of the acyltransferase domain from the second module of the salinomycin polyketide synthase”. X-ray diffraction, 6 pockets (best druggability 0.81). MolNFT v1 #152949 on…

PDB: 6IYO
Type: protein
Length: 836 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Type I modular polyketide synthase
UniProt: H1ZZT3
Pockets: 6 · best druggability 0.81

Structure

x-ray diffraction · 2 distinct chains · 50% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Type I modular polyketide synthase	protein	421	50% helix, 17% strand	H1ZZT3
B	Type I modular polyketide synthase	protein	415	49% helix, 17% strand	H1ZZT3

Pockets

6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1071	0.81	0.82	90	empty
2	365	0.68	0.81	41	empty
3	252	0.67	0.84	33	empty
4	62	0.40	0.80	13	empty
5	79	0.39	0.78	21	empty

Interfaces

1 interface between chains.

A–B · 3841 Å² buried · 55 hydrogen bonds · protein-protein

Compared structures

6IYO · Crystal Structure of the acyltransferase domain from the second module of the salinomycin… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt H1ZZT3
Elsewhere: RCSB PDB 6IYO · PDBe 6IYO · UniProt H1ZZT3

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