MolNFT v1 · #15246 · DNA

An intramolecular quadruplex of (GGA)(4) triplet repeat DNA with a G:G:G:G tetrad and a G(:A):G(:A):G(:A):G heptad, and its dimeric interaction

1MYQ · 5'-D(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3': “An intramolecular quadruplex of (GGA)(4) triplet repeat DNA with a G:G:G:G tetrad and a G(:A):G(:A):G(:A):G…”. Solution nmr. MolNFT v1 #15246 on GenesisL1: 3D structure, binding sites…

PDB: 1MYQ
Type: DNA
Length: 24 nucleotides
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 5'-D(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3'

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	5'-D(GPGPAPGPGPAPGPGPAPGPGPA)-3'	dna	12	—	—

Interfaces

1 interface between chains.

A–B · 567 Å² buried · 55 hydrogen bonds · nucleic-nucleic

Compared structures

1MYQ · An intramolecular quadruplex of (GGA)(4) triplet repeat DNA with a G:G:G:G tetrad and a… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1MYQ · PDBe 1MYQ

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