Research workbench
An intramolecular quadruplex of (GGA)(4) triplet repeat DNA with a G:G:G:G tetrad and a G(:A):G(:A):G(:A):G heptad, and its dimeric interaction
Analyse An intramolecular quadruplex of (GGA)(4) triplet repeat DNA with a G:G:G:G… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1MYQ
- Type
- DNA
- Length
- 24 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-D(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3'
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | 5'-D(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3' | dna | 12 | — | — |
Interfaces
1 interface between chains.
- A–B · 567 Ų buried · 55 hydrogen bonds · nucleic-nucleic
Compared structures
- 1MYQ · An intramolecular quadruplex of (GGA)(4) triplet repeat DNA with a G:G:G:G tetrad and a… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1MYQ · PDBe 1MYQ
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