MolNFT v1 · #152437 · protein
Crystal structure of malate dehydrogenase from metallosphaera sedula
6IHE: “Crystal structure of malate dehydrogenase from metallosphaera sedula”. X-ray diffraction, 2 ligands (NAD, MLT). MolNFT v1 #152437 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6IHE
- Type
- protein
- Length
- 606 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A088E2H7
- Ligands
- NAD, MLT
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 303 | — | A0A088E2H7 |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 2 copies · chains A, B
- MLT · D-malate · ligand · 2 copies · chains A, B
- PGE · Triethylene glycol · additive · 5 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 4 copies · chains A, B
- GOL · Glycerol · additive · 2 copies · chains A, B
- PG4 · Tetraethylene glycol · additive · 2 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6IHE · Crystal structure of Malate dehydrogenase from Metallosphaera sedula · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A088E2H7
- Elsewhere: RCSB PDB 6IHE · PDBe 6IHE · UniProt A0A088E2H7
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