MolNFT v1 · #151985 · protein
Crystal structure of the human mitochondrial PRELID1K58V-TRIAP1 complex with ps
6I3Y: “Crystal structure of the human mitochondrial PRELID1K58V-TRIAP1 complex with ps”. X-ray diffraction, 1 ligand (P5S). MolNFT v1 #151985 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6I3Y
- Type
- protein
- Length
- 498 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9Y255, O43715
- Ligands
- P5S
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C | — | protein | 173 | — | Q9Y255 |
| F | — | protein | 183 | — | Q9Y255 |
| A | — | protein | 74 | — | O43715 |
| H | — | protein | 68 | — | O43715 |
Ligands and binding sites
- P5S · O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy) propyl]oxy}(hydroxy)phosphoryl]-L-serine · ligand · chains C
- LMT · Dodecyl-beta-D-maltoside · additive · chains C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6I3Y · Crystal structure of the human mitochondrial PRELID1K58V-TRIAP1 complex with PS · the same entry in another collection · chain H against H, TM-score 1.00
- O43715 · AlphaFold monomer V2.0 prediction for TP53-regulated inhibitor of apoptosis 1 (O43715) · a predicted model of the same protein · chain H against A, TM-score 0.90
- Q9Y255 · AlphaFold monomer V2.0 prediction for preli domain-containing protein 1, mitochondrial… · a predicted model of the same protein · chain C against A, TM-score 0.77
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y255
- Every structure of UniProt O43715
- Elsewhere: RCSB PDB 6I3Y · PDBe 6I3Y · UniProt Q9Y255 · UniProt O43715
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