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MolNFT v1 · #151985 · protein

Crystal structure of the human mitochondrial PRELID1K58V-TRIAP1 complex with ps

6I3Y: “Crystal structure of the human mitochondrial PRELID1K58V-TRIAP1 complex with ps”. X-ray diffraction, 1 ligand (P5S). MolNFT v1 #151985 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6I3Y
Type
protein
Length
498 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9Y255, O43715
Ligands
P5S

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
C—protein173—Q9Y255
F—protein183—Q9Y255
A—protein74—O43715
H—protein68—O43715

Ligands and binding sites

  • P5S · O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy) propyl]oxy}(hydroxy)phosphoryl]-L-serine · ligand · chains C
  • LMT · Dodecyl-beta-D-maltoside · additive · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6I3Y · Crystal structure of the human mitochondrial PRELID1K58V-TRIAP1 complex with PS · the same entry in another collection · chain H against H, TM-score 1.00
  • O43715 · AlphaFold monomer V2.0 prediction for TP53-regulated inhibitor of apoptosis 1 (O43715) · a predicted model of the same protein · chain H against A, TM-score 0.90
  • Q9Y255 · AlphaFold monomer V2.0 prediction for preli domain-containing protein 1, mitochondrial… · a predicted model of the same protein · chain C against A, TM-score 0.77

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