MolNFT v1 · #151585 · protein

N-terminal domain including the conserved IMPA_N region of the tssa component of the type VI secretion system from burkholderia cenocepacia

6HS5: “N-terminal domain including the conserved IMPA_N region of the tssa component of the type VI secretion system…”. X-ray diffraction, 1 ligand (CA), 1 pocket (best druggability 0.30). MolNFT v1 #151585 on GenesisL1: 3D structure…

PDB: 6HS5
Type: protein
Length: 249 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tssa
UniProt: A0A1V2W6E8
Ligands: CA
Pockets: 1 · best druggability 0.30

Structure

x-ray diffraction · 1 distinct chain · 66% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Tssa	protein	249	66% helix, 3% strand	A0A1V2W6E8

Ligands and binding sites

CA · Calcium ion · metal · 2 copies · chains A
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	53	0.30	0.75	16	empty

Compared structures

6HS5 · N-terminal domain including the conserved ImpA_N region of the TssA component of the type… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A1V2W6E8
Elsewhere: RCSB PDB 6HS5 · PDBe 6HS5 · UniProt A0A1V2W6E8

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