MolNFT v1 · #151318 · protein

Crystal structure of TEX12 F102A F109E V116A

6HK9 · Testis-expressed protein 12: “Crystal structure of TEX12 F102A F109E V116A”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #151318 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6HK9
Type: protein
Length: 152 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Testis-expressed protein 12
UniProt: Q9BXU0
Ligands: CA

Structure

x-ray diffraction · 2 distinct chains · 95% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Testis-expressed protein 12	protein	74	95% helix, 0% strand	Q9BXU0
B	Testis-expressed protein 12	protein	78	95% helix, 0% strand	Q9BXU0

Ligands and binding sites

CA · Calcium ion · metal · 7 copies · chains A, B
ACT · Acetate ion · additive · 2 copies · chains A
MRD · (4R)-2-methylpentane-2,4-diol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 1545 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

6HK9 · Crystal structure of TEX12 F102A F109E V116A · the same entry in another collection · chain A against A, TM-score 1.00
Q9BXU0 · AlphaFold monomer V2.0 prediction for testis-expressed protein 12 (Q9BXU0) · a predicted model of the same protein · chain B against A, TM-score 0.87

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9BXU0
Elsewhere: RCSB PDB 6HK9 · PDBe 6HK9 · UniProt Q9BXU0

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