MolNFT v1 · #150965 · protein
Structure of glutamate mutase reconstituted with homo-coenzyme B12
6H9E: “Structure of glutamate mutase reconstituted with homo-coenzyme B12”. X-ray diffraction, 2 ligands (B12, FWK). MolNFT v1 #150965 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6H9E
- Type
- protein
- Length
- 1,240 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P80078, P80077
- Ligands
- B12, FWK
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 137 | — | P80078 |
| B, D | — | protein | 483 | — | P80077 |
Ligands and binding sites
- B12 · Cobalamin · ligand · 2 copies · chains A, B, C, D
- FWK · (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-ethyl-oxolane-3,4-diol · ligand · 2 copies · chains B, D
- GOL · Glycerol · additive · 5 copies · chains A, B, C, D
- TAR · D(-)-tartaric acid · additive · 2 copies · chains B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6H9E · Structure of glutamate mutase reconstituted with homo-coenzyme B12 · the same entry in another collection · chain A against A, TM-score 1.00
- P80077 · AlphaFold monomer V2.0 prediction for glutamate mutase epsilon subunit (P80077) · a predicted model of the same protein · chain B against A, TM-score 1.00
- P80078 · AlphaFold monomer V2.0 prediction for glutamate mutase sigma subunit (P80078) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P80078
- Every structure of UniProt P80077
- Elsewhere: RCSB PDB 6H9E · PDBe 6H9E · UniProt P80078 · UniProt P80077
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