MolNFT v1 · #150936 · protein
Structure of peptidoglycan deacetylase pdac from bacillus subtilis
6H8L: “Structure of peptidoglycan deacetylase pdac from bacillus subtilis”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #150936 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6H8L
- Type
- protein
- Length
- 408 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O34798
- Ligands
- ZN
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 202 | — | O34798 |
| B | — | protein | 206 | — | O34798 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
- TLA · L(+)-tartaric acid · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6H8L · Structure of peptidoglycan deacetylase PdaC from Bacillus subtilis · the same entry in another collection · chain A against A, TM-score 1.00
- O34798 · AlphaFold monomer V2.0 prediction for peptidoglycan-N-acetylmuramic acid deacetylase pdac… · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O34798
- Elsewhere: RCSB PDB 6H8L · PDBe 6H8L · UniProt O34798
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.