MolNFT v1 · #150883 · protein
GI.1 human norovirus protruding domain in complex with nano-94 and 2- fucosyllactose (2FL)
6H72: “GI.1 human norovirus protruding domain in complex with nano-94 and 2- fucosyllactose (2FL)”. X-ray diffraction, 3 ligands (GLC, GAL, FUC). MolNFT v1 #150883 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6H72
- Type
- protein
- Length
- 821 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q83884
- Ligands
- GLC, GAL, FUC
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 290 | — | Q83884 |
| C | — | protein | 121 | — | — |
| D | — | protein | 120 | — | — |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 2 copies
- GAL · beta-D-galactopyranose · sugar · 2 copies · chains A, B
- FUC · alpha-L-fucopyranose · sugar · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6H72 · GI.1 human norovirus protruding domain in complex with Nano-94 and 2-fucosyllactose (2FL) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q83884
- Elsewhere: RCSB PDB 6H72 · PDBe 6H72 · UniProt Q83884
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