MolNFT v1 · #150876 · protein
Structure of the ubid-class enzyme hmff from pelotomaculum thermopropionicum in complex with FMN
6H6V: “Structure of the ubid-class enzyme hmff from pelotomaculum thermopropionicum in complex with FMN”. X-ray diffraction, 4 ligands (FMN, K, MN). MolNFT v1 #150876 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6H6V
- Type
- protein
- Length
- 2,670 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A5D4Z9
- Ligands
- FMN, K, MN, CA
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, E | — | protein | 445 | — | A5D4Z9 |
| D | — | protein | 444 | — | A5D4Z9 |
| F | — | protein | 446 | — | A5D4Z9 |
Ligands and binding sites
- FMN · Flavin mononucleotide · ligand · 6 copies · chains A, B, C, D, E, F
- K · Potassium ion · metal · 6 copies · chains A, B, C, D, E, F
- MN · Manganese (II) ion · metal · 6 copies · chains A, B, C, D, E, F
- CA · Calcium ion · metal · 6 copies · chains A, B, C, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6H6V · Structure of the UbiD-class enzyme HmfF from Pelotomaculum thermopropionicum in complex… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5D4Z9
- Elsewhere: RCSB PDB 6H6V · PDBe 6H6V · UniProt A5D4Z9
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