MolNFT v1 · #150825 · protein
Myxococcus xanthus mgla in complex with its gap mglb and gtpgammas
6H5B: “Myxococcus xanthus mgla in complex with its gap mglb and gtpgammas”. X-ray diffraction, 2 ligands (GSP, MG). MolNFT v1 #150825 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6H5B
- Type
- protein
- Length
- 442 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q1DB04, Q50883
- Ligands
- GSP, MG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 190 | — | Q1DB04 |
| B | — | protein | 129 | — | Q50883 |
| C | — | protein | 123 | — | Q50883 |
Ligands and binding sites
- GSP · 5'-guanosine-diphosphate-monothiophosphate · ligand · chains A
- MG · Magnesium ion · metal · chains A
- PEG · Di(hydroxyethyl)ether · additive · 3 copies
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · 2 copies · chains A
- 1PE · Pentaethylene glycol · additive · 2 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6H5B · Myxococcus xanthus MglA in complex with its GAP MglB and GTPgammaS · the same entry in another collection · chain A against A, TM-score 1.00
- Q1DB04 · AlphaFold monomer V2.0 prediction for mutual gliding-motility protein mgla (Q1DB04) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1DB04
- Every structure of UniProt Q50883
- Elsewhere: RCSB PDB 6H5B · PDBe 6H5B · UniProt Q1DB04 · UniProt Q50883
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.