MolNFT v1 · #150620 · protein

First germn domain of the sporulation protein germ from bacillus subtilis

6GZ8: “First germn domain of the sporulation protein germ from bacillus subtilis”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #150620 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6GZ8
Type: protein
Length: 133 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P39072
Ligands: NA

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	133	—	P39072

Ligands and binding sites

NA · Sodium ion · metal · 11 copies · chains A
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6GZ8 · First GerMN domain of the sporulation protein GerM from Bacillus subtilis · the same entry in another collection · chain A against A, TM-score 1.00
P39072 · AlphaFold monomer V2.0 prediction for spore germination protein germ (P39072) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P39072
Elsewhere: RCSB PDB 6GZ8 · PDBe 6GZ8 · UniProt P39072

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.