MolNFT v1 · #150424 · protein
Alpha-galactosidase mutant D378A from thermotoga maritima in complex with intact cyclohexene-based carbasugar mimic of galactose with 3,5 difluorophenyl leaving group
6GTA: “Alpha-galactosidase mutant D378A from thermotoga maritima in complex with intact cyclohexene-based carbasugar…”. X-ray diffraction, 3 ligands (F9W, MG, SO4). MolNFT v1 #150424 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6GTA
- Type
- protein
- Length
- 531 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G4FEF4
- Ligands
- F9W, MG, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 531 | — | G4FEF4 |
Ligands and binding sites
- F9W · (1~{R},2~{S},3~{S},6~{S})-6-[3,5-bis(fluoranyl) phenoxy]-4-(hydroxymethyl)cyclohex-4-ene-1,2,3-triol · ligand · chains A
- MG · Magnesium ion · metal · 2 copies · chains A
- SO4 · Sulfate ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GTA · Alpha-galactosidase mutant D378A from Thermotoga maritima in complex with intact… · the same entry in another collection · chain A against A, TM-score 1.00
- G4FEF4 · AlphaFold monomer V2.0 prediction for alpha-galactosidase (G4FEF4) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G4FEF4
- Elsewhere: RCSB PDB 6GTA · PDBe 6GTA · UniProt G4FEF4
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