MolNFT v1 · #149960 · protein

Delta-N METTL16 mtase domain

6GFK: “Delta-N METTL16 mtase domain”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #149960 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6GFK
Type: protein
Length: 671 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q86W50
Ligands: SO4

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	231	—	Q86W50
B	—	protein	221	—	Q86W50
C	—	protein	219	—	Q86W50

Ligands and binding sites

SO4 · Sulfate ion · ion · 5 copies · chains A, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6GFK · delta-N METTL16 MTase domain · the same entry in another collection · chain A against A, TM-score 1.00
Q86W50 · AlphaFold monomer V2.0 prediction for RNA N6-adenosine- methyltransferase METTL16 (Q86W50) · a predicted model of the same protein · chain C against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q86W50
Elsewhere: RCSB PDB 6GFK · PDBe 6GFK · UniProt Q86W50

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