MolNFT v1 · #149874 · protein
Trypanosoma brucei PTR1 in complex with inhibitor 4G (F133)
6GD0: “Trypanosoma brucei PTR1 in complex with inhibitor 4G (F133)”. X-ray diffraction, 2 ligands (NAP, EV8). MolNFT v1 #149874 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GD0
- Type
- protein
- Length
- 992 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O76290
- Ligands
- NAP, EV8
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 254 | — | O76290 |
| B | — | protein | 250 | — | O76290 |
| C | — | protein | 239 | — | O76290 |
| D | — | protein | 249 | — | O76290 |
Ligands and binding sites
- NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · ligand · 4 copies · chains A, B, C, D
- EV8 · Methyl 1-[4-[[(2-azanyl-1,3-benzothiazol-6-yl) carbonylamino]methyl]phenyl]carbonylpiperidine-4-carboxylate · ligand · 3 copies · chains A, B, D
- ACT · Acetate ion · additive · 2 copies · chains A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GD0 · Trypanosoma brucei PTR1 in complex with inhibitor 4g (F133) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O76290
- Elsewhere: RCSB PDB 6GD0 · PDBe 6GD0 · UniProt O76290
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