MolNFT v1 · #149275 · protein
Mutant DNA polymerase sliding clamp from escherichia COLI with bound P7 peptide
6FVM: “Mutant DNA polymerase sliding clamp from escherichia COLI with bound P7 peptide”. X-ray diffraction, 2 ligands (ACE, CA). MolNFT v1 #149275 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FVM
- Type
- protein
- Length
- 746 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0A990
- Ligands
- ACE, CA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 368 | — | P0A990 |
| H, I | — | protein | 5 | — | — |
Ligands and binding sites
- ACE · Acetyl group · ligand · 2 copies · chains A, H, B, I
- CA · Calcium ion · metal · chains A
- 1PE · Pentaethylene glycol · additive · 9 copies · chains A, B
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FVM · Mutant DNA polymerase sliding clamp from Escherichia coli with bound P7 peptide · the same entry in another collection · chain A against A, TM-score 1.00
- P0A990 · AlphaFold monomer V2.0 prediction for beta sliding clamp (P0A990) · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A990
- Elsewhere: RCSB PDB 6FVM · PDBe 6FVM · UniProt P0A990
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