MolNFT v1 · #14927 · protein
Crystal structure of coral protein mutant
1MOV · GFP-like non-fluorescent chromoprotein: “Crystal structure of coral protein mutant”. X-ray diffraction, 2 ligands (CRQ, IOD), 2 pockets (best druggability 0.72). MolNFT v1 #14927 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 1MOV
- Type
- protein
- Length
- 218 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- GFP-like non-fluorescent chromoprotein
- UniProt
- P83690
- Ligands
- CRQ, IOD
- Pockets
- 2 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | GFP-like non-fluorescent chromoprotein | protein | 218 | 5% helix, 57% strand | P83690 |
Ligands and binding sites
- CRQ · [2-(3-carbamoyl-1-imino-propyl)-4-(4-hydroxy-benzylidene)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid · ligand · chains A
- IOD · Iodide ion · ion · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 67 | 0.72 | 0.98 | 18 | CRQ |
| 2 | 71 | 0.40 | 0.79 | 19 | empty |
Modifications
Observed in the structure: 2 cofactor (chromophore).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P83690
- Elsewhere: RCSB PDB 1MOV · PDBe 1MOV · UniProt P83690
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