MolNFT v1 · #149257 · protein
Structure of human coronavirus NL63 main protease in complex with the alpha-ketoamide (S)-N-benzyl-3-((S)-2-cinnamamido-3- phenylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-YL)BUTANAMIDE (cinnamoyl-phenylalanine-glnlactam-co-co-nh-benzyl)
6FV2: “Structure of human coronavirus NL63 main protease in complex with the alpha-ketoamide…”. X-ray diffraction, 1 ligand (D03). MolNFT v1 #149257 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FV2
- Type
- protein
- Length
- 899 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0C6X5
- Ligands
- D03
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 301 | — | P0C6X5 |
| B, C | — | protein | 299 | — | P0C6X5 |
Ligands and binding sites
- D03 · (S)-N-benzyl-3-((S)-2-cinnamamido-3-phenylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-yl)butanamide · ligand · 3 copies · chains A, B, C
- GOL · Glycerol · additive · 3 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FV2 · Structure of human coronavirus NL63 main protease in complex with the alpha-ketoamide… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C6X5
- Elsewhere: RCSB PDB 6FV2 · PDBe 6FV2 · UniProt P0C6X5
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