MolNFT v1 · #149116 · protein + DNA
Crystal structure of tale homeobox domain transcription factor TGIF1 with its consensus DNA
6FQP: “Crystal structure of tale homeobox domain transcription factor TGIF1 with its consensus DNA”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #149116 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FQP
- Type
- protein + DNA
- Length
- 165 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q15583
- Ligands
- CA
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| L, M | — | dna | 16 | — | — |
| A | — | protein | 67 | — | Q15583 |
| B | — | protein | 66 | — | Q15583 |
Ligands and binding sites
- CA · Calcium ion · metal · chains L, M
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FQP · Crystal structure of TALE homeobox domain transcription factor TGIF1 with its consensus… · the same entry in another collection · chain L against L, TM-score 1.00
- Q15583 · AlphaFold monomer V2.0 prediction for homeobox protein TGIF1 (Q15583) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q15583
- Elsewhere: RCSB PDB 6FQP · PDBe 6FQP · UniProt Q15583
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