MolNFT v1 · #149040 · protein
F1-ATPase from mycobacterium smegmatis
6FOC: “F1-ATPase from mycobacterium smegmatis”. X-ray diffraction, 3 ligands (ADP, MG, PO4). MolNFT v1 #149040 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FOC
- Type
- protein
- Length
- 3,073 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0R202, A0R200, A0R201, A0R1Z9
- Ligands
- ADP, MG, PO4
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 481 | — | A0R202 |
| B | — | protein | 464 | — | A0R202 |
| C | — | protein | 469 | — | A0R202 |
| D | — | protein | 451 | — | A0R200 |
| E | — | protein | 448 | — | A0R200 |
| F | — | protein | 454 | — | A0R200 |
| G | — | protein | 193 | — | A0R201 |
| H | — | protein | 113 | — | A0R1Z9 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 5 copies · chains A, D, B, E, C, F
- MG · Magnesium ion · metal · 5 copies · chains A, B, C, D, F
- PO4 · Phosphate ion · ion · chains A, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FOC · F1-ATPase from Mycobacterium smegmatis · the same entry in another collection · chain H against H, TM-score 1.00
- A0R202 · AlphaFold monomer V2.0 prediction for ATP synthase subunit alpha (A0R202) · a predicted model of the same protein · chain C against A, TM-score 0.99
- A0R200 · AlphaFold monomer V2.0 prediction for ATP synthase subunit beta (A0R200) · a predicted model of the same protein · chain E against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0R202
- Every structure of UniProt A0R200
- Every structure of UniProt A0R201
- Every structure of UniProt A0R1Z9
- Elsewhere: RCSB PDB 6FOC · PDBe 6FOC · UniProt A0R202 · UniProt A0R200 · UniProt A0R201 · UniProt A0R1Z9
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