MolNFT v1 · #149016 · protein
Crystal structure of ephrin B4 (EPHB4) receptor protein kinase with dasatinib
6FNM: “Crystal structure of ephrin B4 (EPHB4) receptor protein kinase with dasatinib”. X-ray diffraction, 1 ligand (1N1). MolNFT v1 #149016 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FNM
- Type
- protein
- Length
- 270 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P54760
- Ligands
- 1N1
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 270 | — | P54760 |
Ligands and binding sites
- 1N1 · N-(2-chloro-6-methylphenyl)-2-({6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl}amino)-1,3-thiazole-5-carboxamide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FNM · Crystal Structure of Ephrin B4 (EphB4) Receptor Protein Kinase with Dasatinib · the same entry in another collection · chain A against A, TM-score 1.00
- P54760 · AlphaFold monomer V2.0 prediction for ephrin type-B receptor 4 (P54760) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54760
- Elsewhere: RCSB PDB 6FNM · PDBe 6FNM · UniProt P54760
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