MolNFT v1 · #148788 · protein

Cyanidioschyzon merolae DNM1 (CMDNM1)

6FGZ · Dynamin: “Cyanidioschyzon merolae DNM1 (CMDNM1)”. X-ray diffraction, 7 pockets (best druggability 0.77). MolNFT v1 #148788 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6FGZ
Type: protein
Length: 526 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Dynamin
UniProt: Q84Y91
Pockets: 7 · best druggability 0.77

Structure

x-ray diffraction · 1 distinct chain · 62% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Dynamin	protein	526	62% helix, 10% strand	Q84Y91

Pockets

7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	455	0.77	0.86	83	empty
2	314	0.74	0.87	67	empty
3	409	0.69	0.81	58	empty
4	514	0.68	0.79	66	empty
5	187	0.62	0.83	45	empty

Compared structures

6FGZ · Cyanidioschyzon merolae Dnm1 (CmDnm1) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q84Y91
Elsewhere: RCSB PDB 6FGZ · PDBe 6FGZ · UniProt Q84Y91

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.