Research workbench
Cyanidioschyzon merolae DNM1 (CMDNM1)
Analyse Cyanidioschyzon merolae DNM1 (CMDNM1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6FGZ
- Type
- protein
- Length
- 526 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dynamin
- UniProt
- Q84Y91
- Pockets
- 7 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 62% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dynamin | protein | 526 | 62% helix, 10% strand | Q84Y91 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 455 | 0.77 | 0.86 | 83 | empty |
| 2 | 314 | 0.74 | 0.87 | 67 | empty |
| 3 | 409 | 0.69 | 0.81 | 58 | empty |
| 4 | 514 | 0.68 | 0.79 | 66 | empty |
| 5 | 187 | 0.62 | 0.83 | 45 | empty |
Compared structures
- 6FGZ · Cyanidioschyzon merolae Dnm1 (CmDnm1) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q84Y91
- Elsewhere: RCSB PDB 6FGZ · PDBe 6FGZ · UniProt Q84Y91
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