MolNFT v1 · #148730 · protein

Fmdv leader protease bound to substrate ISG15

6FFA: “Fmdv leader protease bound to substrate ISG15”. X-ray diffraction, 2 ligands (AYE, SO4). MolNFT v1 #148730 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6FFA
Type: protein
Length: 233 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P03305, P05161
Ligands: AYE, SO4

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	156	—	P03305
B	—	protein	77	—	P05161

Ligands and binding sites

AYE · prop-2-en-1-amine · ligand · chains A, B
SO4 · Sulfate ion · ion · 3 copies · chains A
GOL · Glycerol · additive · 5 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6FFA · FMDV Leader protease bound to substrate ISG15 · the same entry in another collection · chain A against A, TM-score 1.00
P05161 · AlphaFold monomer V2.0 prediction for ubiquitin-like protein ISG15 (P05161) · a predicted model of the same protein · chain B against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P03305
Every structure of UniProt P05161
Elsewhere: RCSB PDB 6FFA · PDBe 6FFA · UniProt P03305 · UniProt P05161

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