MolNFT v1 · #148679 · protein

Human RIO2 kinase structure

6FDM: “Human RIO2 kinase structure”. X-ray diffraction, 2 ligands (ANP, NA). MolNFT v1 #148679 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6FDM
Type: protein
Length: 1,134 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9BVS4
Ligands: ANP, NA

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	286	—	Q9BVS4
B	—	protein	280	—	Q9BVS4
C	—	protein	285	—	Q9BVS4
D	—	protein	283	—	Q9BVS4

Ligands and binding sites

ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 2 copies · chains A, C
NA · Sodium ion · metal · 2 copies · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6FDM · Human Rio2 kinase structure · the same entry in another collection · chain D against D, TM-score 1.00
Q9BVS4 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase RIO2 (Q9BVS4) · a predicted model of the same protein · chain B against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9BVS4
Elsewhere: RCSB PDB 6FDM · PDBe 6FDM · UniProt Q9BVS4

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