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MolNFT v1 · #148575 · protein

Crystal structure of human BAZ2A phd zinc finger in complex with FR23

6FAP: “Crystal structure of human BAZ2A phd zinc finger in complex with FR23”. X-ray diffraction, 3 ligands (D3H, ZN, PO4). MolNFT v1 #148575 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6FAP
Type
protein
Length
209 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9UIF9
Ligands
D3H, ZN, PO4

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, D—protein53—Q9UIF9
B—protein51—Q9UIF9
C—protein52—Q9UIF9

Ligands and binding sites

  • D3H · ~{N}-(4-aminophenyl)-2-azanyl-ethanamide · ligand · 2 copies · chains B, C
  • ZN · Zinc ion · metal · 8 copies · chains A, B, C, D
  • PO4 · Phosphate ion · ion · 3 copies · chains A, B, D
  • GOL · Glycerol · additive · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6FAP · Crystal structure of human BAZ2A PHD zinc finger in complex with Fr23 · the same entry in another collection · chain D against D, TM-score 1.00
  • Q9UIF9 · AlphaFold monomer V2.0 prediction for bromodomain adjacent to zinc finger domain protein… · a predicted model of the same protein · chain C against A, TM-score 0.88

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