MolNFT v1 · #148554 · protein
Antibody derived (abd-4) small molecule binding to KRAS.
6FA1: “Antibody derived (abd-4) small molecule binding to KRAS.”. X-ray diffraction, 3 ligands (GNP, D2Z, MG). MolNFT v1 #148554 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FA1
- Type
- protein
- Length
- 1,034 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P01116
- Ligands
- GNP, D2Z, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, E | — | protein | 173 | — | P01116 |
| A, C, D, F | — | protein | 172 | — | P01116 |
Ligands and binding sites
- GNP · Phosphoaminophosphonic acid-guanylate ester · ligand · 6 copies · chains B, A, C, D, E, F
- D2Z · 2-[4-[[(3~{R})-2,3-dihydro-1,4-benzodioxin-3-yl]methylcarbamoyl]phenoxy]ethyl-dimethyl-azanium · ligand · 3 copies · chains B, A, F
- MG · Magnesium ion · metal · 6 copies · chains B, A, C, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FA1 · Antibody derived (Abd-4) small molecule binding to KRAS. · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P01116
- Elsewhere: RCSB PDB 6FA1 · PDBe 6FA1 · UniProt P01116
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